Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2285

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2284: 10652 - Hypothetical Protein, at 525584 to 526132 10652 mRNA_2285: 10653 - SUPERFAMILY--SSF53300, at 526661 to 528036 10653 mRNA_2286: 10654 - Hypothetical Protein, at 528229 to 530268 10654

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
525,665 - 10652 mRNA_2284 0.15 -0.4
525,689 + 10652 mRNA_2284 0.19 -1.4
525,691 + 10652 mRNA_2284 0.19 -0.3
525,713 - 10652 mRNA_2284 0.23 0.6
525,717 + 10652 mRNA_2284 0.24 -0.7
525,719 + 10652 mRNA_2284 0.25 -0.1
525,722 + 10652 mRNA_2284 0.25 0.7
525,727 + 10652 mRNA_2284 0.26 0.1
525,732 + 10652 mRNA_2284 0.27 -1.0
525,747 + 10652 mRNA_2284 0.30 1.5
525,751 + 10652 mRNA_2284 0.30 1.4
525,753 - 10652 mRNA_2284 0.31 0.3
525,754 - 10652 mRNA_2284 0.31 0.4
525,766 - 10652 mRNA_2284 0.33 1.4
525,767 + 10652 mRNA_2284 0.33 0.4
525,773 + 10652 mRNA_2284 0.34 1.0
525,797 + 10652 mRNA_2284 0.39 1.0
525,806 - 10652 mRNA_2284 0.40 0.1
525,833 + 10652 mRNA_2284 0.45 -0.3
525,833 + 10652 mRNA_2284 0.45 1.5
525,847 + 10652 mRNA_2284 0.48 0.6
525,855 + 10652 mRNA_2284 0.49 -0.2
525,857 - 10652 mRNA_2284 0.50 -0.5
525,862 + 10652 mRNA_2284 0.51 2.1
525,864 + 10652 mRNA_2284 0.51 -1.3
525,871 - 10652 mRNA_2284 0.52 0.7
525,876 + 10652 mRNA_2284 0.53 0.9
525,878 - 10652 mRNA_2284 0.54 -0.8
525,971 - 10652 mRNA_2284 0.70 -1.3
525,977 - 10652 mRNA_2284 0.72 1.9
525,987 + 10652 mRNA_2284 0.73 0.5
525,996 - 10652 mRNA_2284 0.75 -1.0
526,002 - 10652 mRNA_2284 0.76 -0.1
526,011 - 10652 mRNA_2284 0.78 1.1
526,020 + 10652 mRNA_2284 0.79 -0.5
526,025 - 10652 mRNA_2284 0.80 -0.3
526,027 - 10652 mRNA_2284 0.81 -1.6
526,040 + 10652 mRNA_2284 0.83 1.0
526,043 - 10652 mRNA_2284 0.84 -0.7
526,045 + 10652 mRNA_2284 0.84 -0.6
526,047 + 10652 mRNA_2284 0.84 0.7
526,052 + 10652 mRNA_2284 0.85 -0.7
526,053 + 10652 mRNA_2284 0.85 0.3
526,056 + 10652 mRNA_2284 0.86 0.3
526,060 + 10652 mRNA_2284 0.87 -1.4
526,060 + 10652 mRNA_2284 0.87 0.2
526,064 + 10652 mRNA_2284 0.87 0.0
526,065 - 10652 mRNA_2284 0.88 0.2
526,066 + 10652 mRNA_2284 0.88 -0.3
526,068 + 10652 mRNA_2284 0.88 -0.1
526,070 + 10652 mRNA_2284 0.89 1.7
526,078 - -0.8
526,082 + -0.1
526,082 - 0.2
526,085 - -1.9
526,087 + -0.7
526,106 + 0.3
526,106 + 1.5
526,116 + -0.8
526,116 - 0.2
526,117 - -0.3
526,125 - 0.4
526,129 + -0.7
526,132 - 1.2
526,138 - -1.0
526,149 + 1.8
526,164 + -2.7
526,174 - -1.6
526,181 - 0.2
526,184 + -1.9
526,186 + 0.1
526,192 + -1.4
526,193 + 1.4
526,195 - 0.9
526,198 + -2.0
526,199 - -0.7
526,204 - 1.5
526,210 + -0.2
526,214 - -0.4
526,234 + -0.1
526,254 - -0.5
526,275 - -0.8
526,279 - 0.1
526,289 - 1.0
526,296 + -0.0
526,297 - 1.2
526,298 + -0.1
526,303 + -0.7
526,307 + -2.1
526,309 - 0.4
526,324 - 1.0
526,331 + 0.5
526,333 + 0.4
526,334 + 0.0
526,344 - -0.2
526,345 - -0.3
526,453 + -0.7
526,460 + 0.6
526,500 + 0.0
526,526 + 0.6
526,655 - -0.4
526,672 + 0.7
526,679 + -0.0
526,804 + 10653 mRNA_2285 0.10 -0.9
526,925 + 10653 mRNA_2285 0.19 -1.1
527,201 + 10653 mRNA_2285 0.39 0.3
527,224 + 10653 mRNA_2285 0.41 0.9
527,297 + 10653 mRNA_2285 0.46 1.4
527,326 - 10653 mRNA_2285 0.48 -0.3
527,334 - 10653 mRNA_2285 0.49 -0.9
527,347 - 10653 mRNA_2285 0.50 0.6
527,645 - 10653 mRNA_2285 0.72 -1.5
527,954 - 0.4
528,213 - 0.1
528,225 - 0.7
528,392 + 1.0