Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2250

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463565 to 464577 10617 mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464729 to 465798 10618 mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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464,631 + 0.5
464,640 + 0.8
464,649 - 1.1
464,651 + 1.4
464,655 + -0.4
464,658 + -0.9
464,661 + 1.5
464,668 - 0.7
464,835 - -0.6
464,835 - 0.5
464,840 + 10618 mRNA_2250 0.10 0.1
464,844 + 10618 mRNA_2250 0.11 -0.6
464,845 - 10618 mRNA_2250 0.11 -0.1
464,845 - 10618 mRNA_2250 0.11 0.6
465,007 + 10618 mRNA_2250 0.26 0.1
465,142 - 10618 mRNA_2250 0.39 0.4
465,280 - 10618 mRNA_2250 0.51 0.9
465,325 + 10618 mRNA_2250 0.56 3.2
465,446 - 10618 mRNA_2250 0.67 0.2
465,560 - 10618 mRNA_2250 0.78 -0.1
465,572 + 10618 mRNA_2250 0.79 -0.4
465,572 + 10618 mRNA_2250 0.79 0.7
465,736 - -1.0
465,742 + -1.2
465,744 + 0.1
465,992 + 1.5
465,993 - -0.0
466,010 + -0.5
466,029 - -0.8
466,142 - 1.5
466,158 + -1.6
466,699 + 10619 mRNA_2251 0.31 -0.4
466,777 + 10619 mRNA_2251 0.36 0.7