Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2176

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255474 to 261372 10543 mRNA_2176: 10544 - Hypothetical Protein, at 262297 to 263218 10544

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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261,417 - 0.1
261,423 - -0.1
261,443 - -0.8
261,458 + 0.8
261,554 - 1.4
261,568 - -0.4
261,588 - -2.2
261,618 + -0.5
261,711 - -2.3
261,879 - 2.0
261,896 + -1.5
262,162 + -1.1
262,312 + 2.4
262,571 - 10544 mRNA_2176 0.30 1.6
262,613 + 10544 mRNA_2176 0.34 -0.1
262,877 - 10544 mRNA_2176 0.63 0.4
262,913 + 10544 mRNA_2176 0.67 -1.5
263,013 - 10544 mRNA_2176 0.78 -2.1
263,499 - 1.4
263,504 + 1.6
263,615 + 1.3
263,623 - -2.0
263,773 + -0.5
263,794 - -1.0
263,816 + -0.0
263,816 + -1.0
263,816 + 1.5
263,819 - 0.8
263,924 - 0.6
263,955 + -2.9
263,966 + -1.2
263,998 + 0.6
264,101 + 1.3