Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2109

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98028 to 98739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99075 to 100834 10478

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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97,173 + 0.8
97,423 - 0.1
97,594 + -2.5
97,614 + -1.1
97,785 + -0.1
97,985 + 1.4
98,073 - 0.0
98,142 - 10477 mRNA_2109 0.16 0.2
98,475 - 10477 mRNA_2109 0.63 -0.3
98,479 - 10477 mRNA_2109 0.63 -0.6
98,479 + 10477 mRNA_2109 0.63 -0.2
98,485 + 10477 mRNA_2109 0.64 1.3
98,617 - 10477 mRNA_2109 0.83 0.3
98,741 - -1.4
98,814 - -0.3
98,897 - 0.2
98,908 - -0.0
98,911 + -0.9
98,913 + 1.4
99,019 + 3.2
99,023 + -0.4
99,079 - 0.0
99,208 - -0.4
99,231 - 0.7
99,346 - 10478 mRNA_2110 0.15 -0.0