Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2105

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2104: 10472 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 81364 to 84462 10472 mRNA_2105: 10473 - K17991 PXG peroxygenase, at 85042 to 86447 10473 mRNA_2106: 10474 - K15710 SHPRH E3 ubiquitin-protein ligase SHPRH, at 86774 to 93150 10474

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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84,198 + 2.0
84,324 + 0.8
84,337 - 0.6
84,393 - 0.5
84,680 + -1.2
85,054 - -2.1
85,227 + 10473 mRNA_2105 0.13 0.5
85,553 - 10473 mRNA_2105 0.36 0.6
85,612 - 10473 mRNA_2105 0.41 0.6
85,645 - 10473 mRNA_2105 0.43 1.2
86,084 - 10473 mRNA_2105 0.74 -1.0
86,133 - 10473 mRNA_2105 0.78 0.1
86,249 - 10473 mRNA_2105 0.86 1.7
86,386 + -0.2
86,489 - 0.4
86,530 + 0.2
86,581 + 1.2
86,654 - 0.1
86,694 - -0.0
86,735 + 0.3
86,795 - 0.5
86,812 - 1.1
86,981 - -0.9
87,006 + 1.5
87,077 + 1.2
87,117 + 0.3
87,301 + -0.4
87,327 + 1.4
87,419 - 10474 mRNA_2106 0.10 1.9
87,432 - 10474 mRNA_2106 0.10 -0.3
87,435 + 10474 mRNA_2106 0.10 4.2