Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2064

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2063: 10431 - SUPERFAMILY--SSF140860, at 861824 to 863143 10431 mRNA_2064: 10432 - KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans, at 863719 to 865833 10432 mRNA_2065: 10433 - Hypothetical Protein, at 866238 to 867408 10433

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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862,909 - 10431 mRNA_2063 0.82 0.5
862,929 - 10431 mRNA_2063 0.84 -0.1
862,978 - 10431 mRNA_2063 0.87 0.4
863,009 - 10431 mRNA_2063 0.90 -0.1
863,068 - 1.3
863,072 - 1.2
863,236 - -0.4
863,240 - 1.0
863,250 - 2.2
863,279 - 2.1
863,331 - 2.2
863,353 + -2.5
863,779 - -0.8
863,786 - -0.5
863,792 - 0.2
863,939 - 10432 mRNA_2064 0.10 -1.0
863,942 - 10432 mRNA_2064 0.11 0.1
864,027 - 10432 mRNA_2064 0.15 0.3
864,237 - 10432 mRNA_2064 0.24 0.2
864,252 + 10432 mRNA_2064 0.25 0.9
864,252 + 10432 mRNA_2064 0.25 1.4
864,263 - 10432 mRNA_2064 0.26 -0.2
864,345 + 10432 mRNA_2064 0.30 0.5
864,361 - 10432 mRNA_2064 0.30 -0.4
864,367 + 10432 mRNA_2064 0.31 0.6
864,434 + 10432 mRNA_2064 0.34 0.0
864,632 - 10432 mRNA_2064 0.43 0.6
864,660 + 10432 mRNA_2064 0.44 0.1
864,717 - 10432 mRNA_2064 0.47 1.9
864,754 - 10432 mRNA_2064 0.49 -0.7
864,812 + 10432 mRNA_2064 0.52 0.1
864,813 - 10432 mRNA_2064 0.52 0.7
864,935 - 10432 mRNA_2064 0.57 -0.1
864,957 + 10432 mRNA_2064 0.59 0.0
864,960 - 10432 mRNA_2064 0.59 1.0
864,970 - 10432 mRNA_2064 0.59 0.4
865,003 - 10432 mRNA_2064 0.61 -0.5
865,007 + 10432 mRNA_2064 0.61 -0.3
865,116 + 10432 mRNA_2064 0.66 -0.3
865,116 - 10432 mRNA_2064 0.66 1.4
865,284 + 10432 mRNA_2064 0.74 0.3
865,304 - 10432 mRNA_2064 0.75 -0.0
865,360 + 10432 mRNA_2064 0.78 0.4
865,451 - 10432 mRNA_2064 0.82 -0.1
865,540 - 10432 mRNA_2064 0.86 0.2
865,547 - 10432 mRNA_2064 0.86 0.6
865,563 + 10432 mRNA_2064 0.87 -0.7
865,706 + 0.1
865,714 - 0.3
865,981 - -0.3
865,998 + 0.3
866,001 - -2.4
866,019 - 1.3
866,024 + 0.8
866,141 - -0.2
866,147 - 1.8
866,174 - -0.1
866,175 - -1.2
866,416 + 10433 mRNA_2065 0.15 0.9
866,426 + 10433 mRNA_2065 0.16 1.4
866,455 - 10433 mRNA_2065 0.19 1.4
866,456 + 10433 mRNA_2065 0.19 -1.6
866,465 - 10433 mRNA_2065 0.19 0.0
866,465 - 10433 mRNA_2065 0.19 2.1
866,517 - 10433 mRNA_2065 0.24 0.1
866,697 - 10433 mRNA_2065 0.39 1.1
866,716 - 10433 mRNA_2065 0.41 1.0