Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2046

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949 10413 mRNA_2046: 10414 - Hypothetical Protein, at 826363 to 829699 10414 mRNA_2047: 10415 - HMMPfam-Spo12 family-PF05032, at 830118 to 830933 10415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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825,381 - 10413 mRNA_2045 0.47 2.2
825,485 + 10413 mRNA_2045 0.56 0.1
825,712 + 10413 mRNA_2045 0.78 -0.4
825,739 - 10413 mRNA_2045 0.80 0.1
825,761 + 10413 mRNA_2045 0.82 0.6
825,978 - -1.3
825,996 + 0.1
826,284 - -1.6
826,315 - 0.0
826,322 + -0.3
826,329 - -1.2
826,337 + -0.7
826,337 - -2.0
826,341 - -0.3
826,359 - 1.2
826,361 + -0.1
826,362 - 0.3
826,406 + 1.2
826,497 - -0.3
826,567 + -1.3
826,662 - 0.1
826,878 - 10414 mRNA_2046 0.15 -0.6
826,917 + 10414 mRNA_2046 0.17 -1.5
826,961 + 10414 mRNA_2046 0.18 -0.8
827,164 + 10414 mRNA_2046 0.24 -0.5
827,212 + 10414 mRNA_2046 0.25 0.0
827,255 + 10414 mRNA_2046 0.27 -0.9
827,375 - 10414 mRNA_2046 0.30 -0.7
827,577 + 10414 mRNA_2046 0.36 0.2
828,220 + 10414 mRNA_2046 0.56 0.5
828,258 - 10414 mRNA_2046 0.57 1.8
828,396 + 10414 mRNA_2046 0.61 -1.6
828,549 + 10414 mRNA_2046 0.66 0.4
828,563 - 10414 mRNA_2046 0.66 2.7
828,853 - 10414 mRNA_2046 0.75 -0.4
829,080 + 10414 mRNA_2046 0.81 0.1
829,118 - 10414 mRNA_2046 0.83 -0.9
829,123 + 10414 mRNA_2046 0.83 -0.0
829,247 - 10414 mRNA_2046 0.86 0.7
829,248 + 10414 mRNA_2046 0.86 0.7
829,311 + 10414 mRNA_2046 0.88 0.0
829,560 - -0.6
829,591 - 1.4
829,691 + 1.4
829,710 + -0.4
829,710 + 0.7
829,873 - -1.7
829,874 + -0.0
829,878 + -1.0