Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2034

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799369 to 800999 10402 mRNA_2035: 10403 - K14824 ERB1, BOP1 ribosome biogenesis protein ERB1, at 801171 to 804014 10403

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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798,432 + -1.1
798,557 + -0.7
798,558 - 0.1
798,570 - -0.2
798,581 - -1.2
798,683 - 0.6
798,723 + -0.7
798,898 + -0.8
798,929 - -0.2
799,017 + -0.3
799,042 + -0.1
799,180 - -0.5
799,195 + -1.2
799,247 + 1.6
799,274 + -0.8
799,339 + 0.9
799,461 + 0.2
799,493 + -2.7
799,522 - 0.9
799,904 + 10402 mRNA_2034 0.33 -0.0
799,924 - 10402 mRNA_2034 0.34 -2.4
800,003 + 10402 mRNA_2034 0.39 0.1
800,700 + 10402 mRNA_2034 0.82 1.1
800,989 - 1.9