Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2029

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2029: 10397 - K07088 K07088 uncharacterized protein, at 784732 to 786233 10397 mRNA_2030: 10398 - KOG2260 Cell division cycle 37 protein, CDC37, at 786522 to 787329 10398

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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783,833 - 0.1
783,854 + -0.1
783,858 - 0.3
783,914 + -1.0
784,091 + -0.5
784,114 - -0.1
784,147 - -0.4
784,181 - -1.2
784,187 + -0.5
784,201 + -2.3
784,309 - -1.2
784,318 - 1.8
784,335 + -0.1
784,339 + -0.3
784,493 - -0.1
784,508 - -0.8
784,526 + -0.4
784,546 - -0.1
784,574 + -1.8
784,677 - -1.1
784,691 + -0.1
784,810 + 0.0
784,893 + 10397 mRNA_2029 0.11 0.0
785,125 + 10397 mRNA_2029 0.26 -0.6
785,410 - 10397 mRNA_2029 0.45 0.6
785,699 + 10397 mRNA_2029 0.64 2.4
785,701 - 10397 mRNA_2029 0.65 1.5
785,702 + 10397 mRNA_2029 0.65 0.0
785,857 + 10397 mRNA_2029 0.75 1.2
786,329 + -0.3
786,348 - -0.4
786,627 - 10398 mRNA_2030 0.13 -0.2
786,716 + 10398 mRNA_2030 0.24 -0.6
786,807 - 10398 mRNA_2030 0.35 -0.6
786,874 + 10398 mRNA_2030 0.44 -0.8
787,075 - 10398 mRNA_2030 0.68 0.7
787,101 - 10398 mRNA_2030 0.72 -0.6
787,225 - 10398 mRNA_2030 0.87 0.4