Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1993

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694051 to 694539 10361 mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695063 to 698759 10362

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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693,067 + 1.1
693,068 - -1.5
693,089 - 1.9
693,095 + 0.9
693,194 - 1.7
693,202 - 0.2
693,210 + 1.5
693,211 + -0.3
693,223 + -2.9
693,223 - 0.9
693,239 + 0.4
693,244 - 0.7
693,248 + -0.3
693,272 + -1.5
693,279 + 0.3
693,315 - -1.2
693,340 - 0.5
693,364 - -1.8
693,374 + -0.4
693,388 - -0.1
693,393 - -0.2
693,399 + 0.0
693,416 - -0.1
693,442 + 1.0
693,553 + 1.2
693,789 - -0.5
693,820 + -0.6
693,839 - -0.3
693,974 + -0.8
694,002 - 0.5
694,425 + 10361 mRNA_1993 0.76 0.1
694,428 - 10361 mRNA_1993 0.77 -0.3
694,463 - 10361 mRNA_1993 0.84 0.7
694,571 - -0.3
694,810 - 1.6
694,816 - 1.3
694,840 + -2.0
694,853 - -1.1
694,854 + -3.2
694,854 - -1.7
694,864 + -0.9
694,881 - -3.5
694,892 - 1.4
694,892 + 0.2
694,898 - -1.5
694,901 - 2.2
694,928 - -0.0
695,026 - 0.9
695,029 + -0.5
695,046 - -0.2