Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1933

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1932: 10300 - BLAST family 69 glycosyltransferase [Melampsora larici-..., at 544727 to 545015 10300 mRNA_1933: 10301 - Hypothetical Protein, at 545451 to 545690 10301 mRNA_1934: 10302 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 546191 to 548410 10302

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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544,483 + -1.4
544,489 + -2.9
544,505 + -1.7
544,509 + 1.3
544,630 + -1.6
544,667 - 1.5
544,770 + 10300 mRNA_1932 0.15 -0.4
544,900 - 10300 mRNA_1932 0.60 1.4
544,943 + 10300 mRNA_1932 0.75 -1.4
545,378 + -1.2
545,507 - 10301 mRNA_1933 0.23 1.3
545,522 + 10301 mRNA_1933 0.30 0.8
545,531 + 10301 mRNA_1933 0.33 -0.4
545,539 + 10301 mRNA_1933 0.37 -0.3
545,627 + 10301 mRNA_1933 0.73 2.0
545,632 + 10301 mRNA_1933 0.75 -0.0
545,656 - 10301 mRNA_1933 0.85 0.3
545,677 + -1.3
545,678 + -0.0
545,789 - -1.8
545,801 - 0.6
545,804 - 0.7
545,808 + -0.8
545,808 + -0.4
545,815 - -0.4
545,818 + -1.1
545,819 + -1.4
545,843 + -0.3
545,845 + -0.6
545,846 + 3.2
545,869 - -1.6
545,932 + 1.1
545,965 - 0.2
545,983 + -1.1
545,986 - 0.5
546,008 - 1.0
546,269 - 0.3
546,683 + 10302 mRNA_1934 0.22 0.4
546,687 - 10302 mRNA_1934 0.22 -1.8