Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1885

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1884: 10252 - Hypothetical Protein, at 432578 to 433282 10252 mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433544 to 436141 10253 mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436589 to 438730 10254

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
432,594 + -0.3
432,744 - 10252 mRNA_1884 0.24 1.7
432,781 - 10252 mRNA_1884 0.29 0.6
432,934 + 10252 mRNA_1884 0.50 0.1
433,043 - 10252 mRNA_1884 0.66 1.4
433,088 + 10252 mRNA_1884 0.72 -0.0
433,196 - 10252 mRNA_1884 0.88 0.3
433,197 - 10252 mRNA_1884 0.88 -1.2
433,214 + -0.3
433,265 + 2.1
433,799 + 0.5
434,085 - 10253 mRNA_1885 0.21 0.8
434,117 + 10253 mRNA_1885 0.22 0.3
434,134 - 10253 mRNA_1885 0.23 -0.4
434,708 - 10253 mRNA_1885 0.45 -1.0
434,726 - 10253 mRNA_1885 0.45 -1.5
434,732 + 10253 mRNA_1885 0.46 -1.1
435,124 - 10253 mRNA_1885 0.61 -0.5
435,297 - 10253 mRNA_1885 0.67 0.8
435,310 + 10253 mRNA_1885 0.68 -1.3
435,432 - 10253 mRNA_1885 0.73 1.0
435,864 - 10253 mRNA_1885 0.89 0.2
436,025 - -0.4
436,135 - 0.4
436,142 + -2.2
436,146 + 0.7
436,148 - -2.8
436,172 - 2.3
436,300 + 0.6
436,306 - 0.5
436,323 + -0.3
436,330 - -0.3
436,343 + -3.3
436,347 + 1.7
436,367 - 1.1
436,476 - -1.7
436,508 + -0.4
436,598 - -0.1
436,632 - 1.0
436,969 + 10254 mRNA_1886 0.18 -0.6