Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1831

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1830: 10198 - K00809 DHPS, dys deoxyhypusine synthase, at 317311 to 318689 10198 mRNA_1831: 10199 - KOG3274 Uncharacterized conserved protein, AMMECR1, at 318985 to 319920 10199 mRNA_1832: 10200 - K11188 PRDX6 peroxiredoxin 6, 1-Cys peroxiredoxin, at 320371 to 321858 10200

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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318,870 - -0.2
318,954 - 0.2
318,955 + -1.6
318,961 - -1.0
318,978 + -0.4
319,117 - 10199 mRNA_1831 0.14 -0.2
319,248 - 10199 mRNA_1831 0.28 0.2
319,554 + 10199 mRNA_1831 0.61 -0.1
319,679 + 10199 mRNA_1831 0.74 -2.0
319,841 - -1.3
319,843 - -2.6
319,925 + -0.0
319,982 - -0.1
319,989 - -0.6
319,991 + -0.8
319,991 + -1.6
320,002 - -0.1
320,003 - -1.0
320,008 + -0.2
320,038 + -0.5
320,043 + 0.5
320,069 + -0.2
320,088 - -1.3
320,094 - -2.0
320,105 + 0.4
320,111 - -0.7
320,111 + 0.9
320,118 + -0.6
320,126 + -1.4
320,133 - -0.9
320,136 - -0.2
320,136 - -1.1
320,137 + -1.9
320,139 - 2.0
320,140 + -0.3
320,141 - -1.5
320,143 - -1.2
320,149 - -0.4
320,166 + -1.4
320,288 + -0.4
320,310 + 0.2
320,871 + 10200 mRNA_1832 0.34 -0.3
320,916 - 10200 mRNA_1832 0.37 0.1