Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1781

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1781: 10149 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 191396 to 193155 10149 mRNA_1782: 10150 - Hypothetical Protein, at 193433 to 193902 10150

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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190,486 - 0.2
190,487 - 1.7
190,758 + 0.9
190,788 - -0.5
190,792 + -0.9
190,797 - 0.1
190,920 + 1.8
190,923 - -2.1
191,067 - 1.3
191,067 - -0.9
191,225 + -0.4
191,333 - -0.5
191,363 - 1.0
191,518 - 0.2
191,540 + 0.1
191,929 - 10149 mRNA_1781 0.30 0.3
192,403 - 10149 mRNA_1781 0.57 0.9
192,799 + 10149 mRNA_1781 0.80 1.0
192,843 - 10149 mRNA_1781 0.82 -1.2
192,960 + 10149 mRNA_1781 0.89 -1.7
193,067 - 1.0
193,861 + -0.7
193,989 - 0.0