Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1743

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94671 to 96223 10110 mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96619 to 100637 10111 mRNA_1744: 10112 - Hypothetical Protein, at 100843 to 102379 10112

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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95,641 + 10110 mRNA_1742 0.62 1.3
96,365 - 0.5
96,385 + -2.3
96,402 - -2.5
96,545 - 1.1
96,548 + 2.1
96,870 - -0.1
97,029 + 10111 mRNA_1743 0.10 -1.3
97,152 - 10111 mRNA_1743 0.13 2.0
97,896 - 10111 mRNA_1743 0.32 2.1
97,953 - 10111 mRNA_1743 0.33 -0.2
98,050 - 10111 mRNA_1743 0.36 1.0
98,586 + 10111 mRNA_1743 0.49 0.8
98,616 - 10111 mRNA_1743 0.50 -1.0
98,640 + 10111 mRNA_1743 0.50 -0.2
99,211 + 10111 mRNA_1743 0.64 1.0
99,219 - 10111 mRNA_1743 0.65 0.7
99,658 - 10111 mRNA_1743 0.76 0.9
99,713 + 10111 mRNA_1743 0.77 -0.6
99,937 - 10111 mRNA_1743 0.83 -1.3
100,106 + 10111 mRNA_1743 0.87 -1.1
100,213 + 10111 mRNA_1743 0.89 -2.6
100,373 - 0.6
100,381 - 0.1
100,519 - -0.4
100,630 - -0.4
100,656 + 1.0
100,668 + 1.3
100,696 + -1.5
100,748 + -1.5
100,819 - 1.0
101,177 - 10112 mRNA_1744 0.22 2.5
101,182 + 10112 mRNA_1744 0.22 0.0