Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1697

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917668 to 919209 10064 mRNA_1697: 10065 - BLAST Pro41 protein, putative [Rhizoctonia solani AG-3 Rhs1AP], at 919612 to 920343 10065 mRNA_1698: 10066 - K11493 RCC1 regulator of chromosome condensation, at 920689 to 923433 10066

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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918,783 + 10064 mRNA_1696 0.72 0.4
918,954 + 10064 mRNA_1696 0.83 -0.8
918,954 + 10064 mRNA_1696 0.83 -1.1
919,066 + 0.3
919,203 - -0.3
919,222 + 0.3
919,227 - 0.7
919,291 - -1.5
919,292 + -0.2
919,292 + -0.4
919,499 - 1.2
919,696 - 10065 mRNA_1697 0.11 0.6
919,799 + 10065 mRNA_1697 0.26 2.4
919,996 + 10065 mRNA_1697 0.52 1.4
920,132 - 10065 mRNA_1697 0.71 0.6
920,155 + 10065 mRNA_1697 0.74 2.6
920,284 - 0.1
920,393 - 0.2
920,463 + 1.1
920,553 + 0.2
920,555 + 1.7