Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1675

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860201 to 862501 10042 mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863051 to 864755 10043 mRNA_1676: 10044 - SUPERFAMILY--SSF81383, at 865613 to 866688 10044

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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862,207 - 10042 mRNA_1674 0.87 -1.2
862,338 + 0.6
862,472 + -1.7
862,603 + 0.2
862,633 + -0.1
862,669 - -0.7
862,773 + 0.0
862,794 + -0.4
862,821 - -3.0
863,083 - 0.4
863,360 - 10043 mRNA_1675 0.18 2.6
863,467 - 10043 mRNA_1675 0.24 -0.3
863,480 + 10043 mRNA_1675 0.25 -0.3
864,094 - 10043 mRNA_1675 0.61 -0.6
864,123 + 10043 mRNA_1675 0.63 -2.4
864,221 + 10043 mRNA_1675 0.69 -0.4
864,387 - 10043 mRNA_1675 0.78 0.0
864,544 + 10043 mRNA_1675 0.88 1.5
864,550 - 10043 mRNA_1675 0.88 -1.7
864,812 - -1.3
865,105 - 0.9
865,106 - -2.9
865,123 + 1.0
865,386 + 0.2
865,423 - -2.6
865,462 + 0.9
865,695 - -0.9