Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1627

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1626: 9994 - Hypothetical Protein, at 750796 to 751505 9994 mRNA_1627: 9995 - K18551 SDT1 pyrimidine and pyridine-specific 5'-nucleotidase, at 751734 to 753010 9995 mRNA_1628: 9996 - Hypothetical Protein, at 753218 to 753980 9996

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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750,797 - -0.6
750,825 + 1.0
750,992 - 9994 mRNA_1626 0.28 0.2
750,993 + 9994 mRNA_1626 0.28 0.2
751,044 + 9994 mRNA_1626 0.35 0.6
751,155 + 9994 mRNA_1626 0.51 0.2
751,328 + 9994 mRNA_1626 0.75 0.6
751,597 - 1.0
751,614 + 0.5
752,068 + 9995 mRNA_1627 0.26 -0.6
752,287 - 9995 mRNA_1627 0.43 1.1
753,045 + 0.9
753,046 - 0.4
753,203 + 1.0
753,207 + -0.3
753,218 + 1.7
753,219 - -0.6
753,236 - -0.9
753,507 + 9996 mRNA_1628 0.38 0.0
753,819 - 9996 mRNA_1628 0.79 -0.0