Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1613

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722930 to 724798 9982

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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718,812 + 9980 mRNA_1612 0.70 -1.1
718,897 + 9980 mRNA_1612 0.74 0.3
719,049 + 9980 mRNA_1612 0.83 1.1
719,052 - 9980 mRNA_1612 0.83 2.1
719,073 + 9980 mRNA_1612 0.84 -0.6
719,100 + 9980 mRNA_1612 0.85 -0.4
719,203 + 1.3
719,507 + -0.3
719,581 - -1.2
720,237 - 9981 mRNA_1613 0.21 -0.5
720,412 + 9981 mRNA_1613 0.26 0.6
720,516 + 9981 mRNA_1613 0.29 -0.7
720,530 - 9981 mRNA_1613 0.30 0.4
720,665 - 9981 mRNA_1613 0.34 1.4
720,964 + 9981 mRNA_1613 0.43 0.3
721,296 + 9981 mRNA_1613 0.53 0.2
721,551 - 9981 mRNA_1613 0.61 0.3
721,853 - 9981 mRNA_1613 0.70 -0.1
722,132 - 9981 mRNA_1613 0.78 -0.6
722,273 - 9981 mRNA_1613 0.83 -0.9
722,605 - -1.5
722,743 + 1.3
722,884 + 1.8
723,005 - -0.7
723,025 + -0.6
723,030 - 0.9
723,033 + 1.2
723,127 + 9982 mRNA_1614 0.11 -0.2
723,176 - 9982 mRNA_1614 0.13 0.9