Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1560

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1559: 9927 - Hypothetical Protein, at 594333 to 596246 9927 mRNA_1560: 9928 - HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370, at 596443 to 598270 9928 mRNA_1561: 9929 - K01920 gshB, GSS glutathione synthase, at 598631 to 600413 9929

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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596,116 - 1.1
596,310 - 0.4
596,323 + -0.3
596,323 + 0.6
596,417 + -1.2
596,419 + 0.8
596,424 + -1.9
596,608 - -1.2
596,814 + 9928 mRNA_1560 0.20 -1.2
597,038 + 9928 mRNA_1560 0.33 -0.8
597,579 + 9928 mRNA_1560 0.62 0.6
598,006 - 9928 mRNA_1560 0.86 1.2
598,006 - 9928 mRNA_1560 0.86 0.3
598,146 + -1.0
598,308 - 0.3
598,425 - -0.4
598,439 + 0.3
598,441 + -0.5
598,563 - 0.3
598,586 + 0.5
598,589 - -1.0
598,592 + 2.9
598,624 + 0.2