Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1523

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1522: 9890 - K06685 MOB1, Mats MOB kinase activator 1, at 502826 to 504110 9890 mRNA_1523: 9891 - Hypothetical Protein, at 504257 to 504927 9891 mRNA_1524: 9892 - K07178 RIOK1 RIO kinase 1, at 505162 to 507225 9892

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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503,455 - 9890 mRNA_1522 0.49 -0.2
503,475 + 9890 mRNA_1522 0.51 -2.1
503,478 - 9890 mRNA_1522 0.51 0.4
503,488 + 9890 mRNA_1522 0.52 0.6
503,611 + 9890 mRNA_1522 0.61 0.2
503,886 - 9890 mRNA_1522 0.82 2.5
504,058 + 0.6
504,075 - 0.0
504,212 + -0.4
504,353 - 9891 mRNA_1523 0.14 -0.2
504,362 - 9891 mRNA_1523 0.16 1.0
504,363 + 9891 mRNA_1523 0.16 -0.8
504,367 - 9891 mRNA_1523 0.16 -0.3
504,367 + 9891 mRNA_1523 0.16 0.0
504,522 + 9891 mRNA_1523 0.39 -0.5
504,806 - 9891 mRNA_1523 0.82 -0.6
504,826 + 9891 mRNA_1523 0.85 1.0
505,105 + 0.8
505,107 + -1.3
505,127 - -0.4
505,128 + 0.9
505,128 + 0.3
505,140 - 0.3
505,150 - -0.6