Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1477

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1476: 9844 - Hypothetical Protein, at 396388 to 397424 9844 mRNA_1477: 9845 - Hypothetical Protein, at 397872 to 399169 9845 mRNA_1478: 9846 - Hypothetical Protein, at 399796 to 400850 9846

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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396,903 - 9844 mRNA_1476 0.50 0.7
396,927 + 9844 mRNA_1476 0.52 -0.1
396,929 + 9844 mRNA_1476 0.52 1.2
396,943 - 9844 mRNA_1476 0.54 0.1
397,055 + 9844 mRNA_1476 0.64 -0.0
397,066 + 9844 mRNA_1476 0.65 -0.6
397,086 + 9844 mRNA_1476 0.67 1.1
397,221 - 9844 mRNA_1476 0.80 1.9
397,224 - 9844 mRNA_1476 0.81 -0.6
397,238 - 9844 mRNA_1476 0.82 0.2
397,244 + 9844 mRNA_1476 0.83 -0.2
397,246 + 9844 mRNA_1476 0.83 1.9
397,248 - 9844 mRNA_1476 0.83 -0.1
397,252 + 9844 mRNA_1476 0.83 -0.8
397,254 - 9844 mRNA_1476 0.84 1.0
397,264 + 9844 mRNA_1476 0.84 -0.9
397,273 + 9844 mRNA_1476 0.85 -0.2
397,290 + 9844 mRNA_1476 0.87 -0.3
397,293 + 9844 mRNA_1476 0.87 0.2
397,366 + -0.8
397,429 + 0.7
397,433 - -0.5
397,474 - 0.2
397,550 - 0.3
397,589 - 0.5
397,609 + -0.9
397,635 + -0.6
397,679 - 0.1
397,705 - 1.2
397,772 - 1.7
398,071 - 9845 mRNA_1477 0.15 -1.0
398,081 - 9845 mRNA_1477 0.16 1.7
398,202 - 9845 mRNA_1477 0.25 -0.5
398,237 - 9845 mRNA_1477 0.28 2.7
398,653 + 9845 mRNA_1477 0.60 0.1
398,656 - 9845 mRNA_1477 0.60 -0.1
398,659 + 9845 mRNA_1477 0.61 -0.1
398,662 + 9845 mRNA_1477 0.61 -1.4
398,772 - 9845 mRNA_1477 0.69 -0.3
398,774 + 9845 mRNA_1477 0.69 1.4
398,841 + 9845 mRNA_1477 0.75 0.3
398,842 - 9845 mRNA_1477 0.75 0.5
398,870 + 9845 mRNA_1477 0.77 0.5
398,888 + 9845 mRNA_1477 0.78 -1.0
398,962 + 9845 mRNA_1477 0.84 1.4
398,989 + 9845 mRNA_1477 0.86 -0.3
399,033 - 9845 mRNA_1477 0.89 2.3
399,033 + 9845 mRNA_1477 0.89 0.7
399,035 + 9845 mRNA_1477 0.90 1.3
399,166 + 2.2
399,171 + 0.2
399,178 - 0.8
399,179 - -0.2
399,186 - -0.4
399,195 + 1.1
399,200 - 0.2
399,201 + 1.6
399,207 + 0.1
399,217 + 0.3
399,221 + -0.6
399,247 + 0.3
399,269 - 0.3
399,388 - 0.2
399,415 - -0.8
399,495 - -0.5
399,518 - -0.2
399,548 - 1.5
399,629 - 0.3
399,654 - -0.3
399,704 - 0.7
399,740 - -0.2
399,750 + -0.4