Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1449

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313855 to 315152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315530 to 317378 9817 mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317721 to 321691 9818

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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314,952 + 9816 mRNA_1448 0.85 0.0
315,290 - -0.3
315,340 + -0.1
315,402 + 0.3
315,641 - 1.2
316,077 - 9817 mRNA_1449 0.30 -0.4
316,091 + 9817 mRNA_1449 0.30 -0.1
316,099 + 9817 mRNA_1449 0.31 -0.7
316,203 + 9817 mRNA_1449 0.36 1.7
316,827 + 9817 mRNA_1449 0.70 1.0
316,952 - 9817 mRNA_1449 0.77 1.8
316,957 + 9817 mRNA_1449 0.77 0.4
316,977 + 9817 mRNA_1449 0.78 -0.8
316,980 + 9817 mRNA_1449 0.78 -0.2
316,980 + 9817 mRNA_1449 0.78 -0.2
317,144 + 9817 mRNA_1449 0.87 0.7
317,264 - -0.0
317,266 + 0.9
317,284 + 1.3
317,305 - 1.9
317,403 - 0.6
317,414 + -0.2
317,421 + -0.1
317,423 - -0.4
317,432 + 1.1
317,432 + 0.4
317,434 + 0.6
317,449 + -0.9
317,451 - 0.4
317,452 + -0.7
317,488 - -0.6
317,502 - 0.4
317,534 + 0.1
317,553 + -0.1
317,555 + 1.2
317,557 - 0.8
317,561 + 0.8
317,563 + 0.1
317,683 - 0.0