Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1396

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1396: 9764 - Hypothetical Protein, at 172419 to 173406 9764 mRNA_1397: 9765 - K03242 EIF2S3 translation initiation factor 2 subunit 3, at 173685 to 176206 9765

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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171,513 - 0.5
171,624 - 0.1
171,646 - -1.5
171,652 - -1.3
171,654 - 0.1
171,922 + 2.2
171,923 + -0.1
171,934 + 0.7
171,936 - -0.8
171,937 + 0.0
171,953 + 0.6
172,056 - 0.8
172,797 - 9764 mRNA_1396 0.38 0.5
172,804 + 9764 mRNA_1396 0.39 0.1
172,907 + 9764 mRNA_1396 0.49 -1.0
172,969 - 9764 mRNA_1396 0.56 1.0
173,113 - 9764 mRNA_1396 0.70 0.3
173,270 - 9764 mRNA_1396 0.86 0.7
173,376 - 2.0