Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1382

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1381: 9749 - Hypothetical Protein, at 138308 to 139656 9749 mRNA_1382: 9750 - K11805 WDR68, HAN11 WD repeat-containing protein 68, at 139851 to 141572 9750 mRNA_1383: 9751 - HMMPfam-Nse4 C-terminal-PF08743,HMMPfam-Binding domain of Nse4/EID3 to Nse3-MAGE-PF15412, at 142015 to 143615 9751

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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138,861 - 9749 mRNA_1381 0.41 0.6
139,130 - 9749 mRNA_1381 0.61 -0.1
139,142 - 9749 mRNA_1381 0.62 -0.2
139,316 - 9749 mRNA_1381 0.75 1.8
139,420 + 9749 mRNA_1381 0.82 0.0
139,712 + 0.5
139,836 + -0.2
139,858 - -1.0
139,862 + 0.5
139,865 + -0.0
139,868 - 0.1
139,870 + -1.3
140,033 - 9750 mRNA_1382 0.11 -1.3
140,045 - 9750 mRNA_1382 0.11 -0.5
140,050 + 9750 mRNA_1382 0.12 0.2
140,163 + 9750 mRNA_1382 0.18 0.6
140,169 - 9750 mRNA_1382 0.18 0.9
140,185 - 9750 mRNA_1382 0.19 -0.3
140,194 + 9750 mRNA_1382 0.20 -0.1
140,295 - 9750 mRNA_1382 0.26 2.0
140,598 - 9750 mRNA_1382 0.43 1.7
140,643 + 9750 mRNA_1382 0.46 0.0
140,890 - 9750 mRNA_1382 0.60 -0.0
140,904 + 9750 mRNA_1382 0.61 0.1
141,184 + 9750 mRNA_1382 0.77 -0.4
141,214 + 9750 mRNA_1382 0.79 1.5
141,302 - 9750 mRNA_1382 0.84 -0.1
141,348 - 9750 mRNA_1382 0.87 -0.3
141,397 + 9750 mRNA_1382 0.90 -0.5
141,515 - 1.0
141,789 - 0.2
141,817 + 1.1
141,826 - 0.0
141,958 + 0.3