Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1361

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728 mRNA_1361: 9729 - Hypothetical Protein, at 90771 to 91579 9729 mRNA_1362: 9730 - K00507 SCD, desC stearoyl-CoA desaturase (Delta-9 desaturase), at 92515 to 94818 9730

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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89,965 + 9728 mRNA_1360 0.87 -0.1
90,038 + -0.4
90,068 + -0.1
90,145 - -1.3
90,242 - 0.3
90,326 - -1.6
90,328 + 0.4
90,335 - 0.9
90,349 + 0.6
90,350 + 0.2
90,356 + 0.3
90,364 + -0.1
90,374 + -0.1
90,376 - 0.4
90,378 - 0.4
90,532 - -1.0
90,534 - 0.4
90,556 + -0.8
90,568 + 0.7
90,606 - -0.3
90,696 + 0.4
90,709 + -0.6
90,822 - -1.0
90,901 - 9729 mRNA_1361 0.16 0.7
91,118 - 9729 mRNA_1361 0.43 0.9
91,123 - 9729 mRNA_1361 0.44 1.3
91,268 + 9729 mRNA_1361 0.61 -0.3
91,334 + 9729 mRNA_1361 0.70 -0.5
91,554 - -0.7
91,689 + -0.7
91,699 + -0.0
91,714 + -1.5
91,818 - 0.5
91,935 - -0.9
91,935 - 2.1
91,938 + -0.3
91,959 - 0.6
91,978 - 1.4
92,007 + -1.0
92,008 + -0.8
92,008 + -0.6
92,010 + 0.7
92,027 + -0.8
92,058 - 1.4
92,090 - -0.1
92,094 + -0.5
92,105 - 0.0
92,128 + -0.2
92,131 - 0.0
92,142 - -1.5
92,143 + -0.6
92,155 + -0.2
92,162 - 1.1
92,176 - -0.1
92,206 + -0.8
92,212 + -0.5
92,212 - 0.8
92,221 - 1.6
92,255 - -2.9
92,270 - -1.1
92,272 - -0.3
92,282 - -2.0
92,285 + -0.5
92,291 + 2.4
92,295 - -0.2
92,302 - 0.3
92,308 + 1.1