Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1359

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302 9727 mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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84,835 - -0.0
84,864 - 0.6
84,865 + 2.0
84,873 + -0.0
84,898 + 0.4
84,902 + -0.9
84,921 + -0.1
84,922 + -0.1
84,923 + -0.5
84,925 - 0.4
84,925 - 0.6
84,934 + -0.2
84,942 - 0.8
85,049 - -0.7
85,051 - 0.4
85,060 - 0.8
85,064 + 1.1
85,087 - 0.7
85,197 - 0.0
85,217 - 0.4
85,217 + 0.4
85,223 + 0.1
85,341 - 1.9
85,358 + 0.5
85,363 - -0.0
85,363 + -0.4
85,369 + -0.6
85,375 - -0.7
85,375 + 0.5
85,376 - -0.2
85,377 + -0.9
85,388 - 1.8
85,399 - 0.1
85,399 + 0.9
85,403 - -0.1
85,404 + 0.1
85,570 - 0.2
85,584 + 0.5
85,602 + 0.0
85,682 + 2.2
85,867 + -0.2
85,873 + 0.5
86,755 + 9727 mRNA_1359 0.39 0.1
86,836 - 9727 mRNA_1359 0.42 -0.9
87,112 + 9727 mRNA_1359 0.53 -0.7
87,145 - 9727 mRNA_1359 0.54 -1.5
87,215 + 9727 mRNA_1359 0.57 -1.2
87,566 + 9727 mRNA_1359 0.71 -2.0
87,587 - 9727 mRNA_1359 0.72 -0.3
87,713 - 9727 mRNA_1359 0.77 -0.1
87,736 + 9727 mRNA_1359 0.78 0.0
87,769 + 9727 mRNA_1359 0.79 -2.7
88,292 + -1.7
88,298 - -1.7
88,415 - -0.0
88,416 + -0.5
88,434 - -1.2
88,457 - -0.5
88,468 + 0.5
88,568 - 0.5
88,576 - 0.5
88,585 - 0.2
88,603 + -0.8
88,604 - 0.3
88,727 + -0.3
88,736 - -1.3
89,033 - 9728 mRNA_1360 0.27 -0.9
89,050 - 9728 mRNA_1360 0.28 -0.5