Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1327

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695 mRNA_1328: 9696 - SUPERFAMILY--SSF82708, at 5867 to 7721 9696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,888 - -0.2
1,889 - 1.3
2,000 + -0.1
2,009 + 1.0
2,141 - 0.9
2,152 - 1.8
2,166 + 0.9
2,167 + -0.7
2,173 + 0.1
2,180 - -0.1
2,180 + -0.6
2,189 + 0.5
2,189 + 1.6
2,197 + -1.4
2,246 + -1.2
2,333 - 1.0
2,471 + 0.5
2,490 + -0.3
2,751 + -0.6
2,779 - 2.1
3,057 + 9695 mRNA_1327 0.19 2.2
3,065 + 9695 mRNA_1327 0.19 0.4
3,139 - 9695 mRNA_1327 0.22 -0.2
3,139 - 9695 mRNA_1327 0.22 -0.4
3,354 - 9695 mRNA_1327 0.29 -0.7
3,360 + 9695 mRNA_1327 0.29 -0.0
3,360 + 9695 mRNA_1327 0.29 -0.9
3,445 - 9695 mRNA_1327 0.32 1.3
3,475 - 9695 mRNA_1327 0.33 0.0
3,516 - 9695 mRNA_1327 0.34 1.4
3,608 - 9695 mRNA_1327 0.37 -0.0
3,614 + 9695 mRNA_1327 0.37 -0.4
3,714 - 9695 mRNA_1327 0.40 -0.3
3,728 + 9695 mRNA_1327 0.41 0.1
3,758 + 9695 mRNA_1327 0.42 0.5
3,761 - 9695 mRNA_1327 0.42 1.3
3,771 - 9695 mRNA_1327 0.42 -0.1
3,792 - 9695 mRNA_1327 0.43 0.6
3,798 + 9695 mRNA_1327 0.43 0.3
3,799 + 9695 mRNA_1327 0.43 0.9
3,921 - 9695 mRNA_1327 0.47 0.2
3,997 + 9695 mRNA_1327 0.50 -0.8
3,998 - 9695 mRNA_1327 0.50 -1.7
3,998 - 9695 mRNA_1327 0.50 -0.7
4,008 - 9695 mRNA_1327 0.50 -0.8
4,193 - 9695 mRNA_1327 0.56 -0.6
4,209 - 9695 mRNA_1327 0.57 0.8
4,346 + 9695 mRNA_1327 0.61 0.4
4,346 + 9695 mRNA_1327 0.61 0.3
4,487 - 9695 mRNA_1327 0.66 0.3
4,498 - 9695 mRNA_1327 0.66 -2.7
4,512 - 9695 mRNA_1327 0.66 0.7
4,598 + 9695 mRNA_1327 0.69 0.3
4,763 - 9695 mRNA_1327 0.75 0.1
4,938 + 9695 mRNA_1327 0.80 0.3
5,367 - -0.1
5,399 - 0.1
5,655 - 0.8
5,846 + 1.8
5,952 - -0.3
6,136 + 9696 mRNA_1328 0.15 0.0
6,296 - 9696 mRNA_1328 0.23 -0.2
6,297 + 9696 mRNA_1328 0.23 0.6
6,319 + 9696 mRNA_1328 0.24 -0.6
6,399 - 9696 mRNA_1328 0.29 -0.3
6,430 - 9696 mRNA_1328 0.30 -0.2
6,442 + 9696 mRNA_1328 0.31 2.9
6,445 - 9696 mRNA_1328 0.31 0.8