Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1280

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1280: 9648 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657, at 825311 to 827101 9648 mRNA_1281: 9649 - HMMPfam-Peptidase M50B-like-PF13398, at 827341 to 829667 9649

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
824,386 - 0.0
824,792 - 0.8
824,796 + -0.6
824,800 + 0.3
824,821 + -2.7
824,821 + 1.6
824,866 + 1.2
824,874 - 0.5
824,874 + 1.1
824,894 + 0.9
825,013 + 2.4
825,046 - 0.0
825,053 + 0.3
825,054 - -0.2
825,095 - -1.0
825,116 - -0.2
825,141 + -0.9
825,141 + 0.3
825,178 - 0.8
825,184 - 1.0
825,190 + 0.5
825,191 - -1.0
825,193 - 1.3
825,198 + 0.1
825,200 - -0.7
825,206 + 1.2
825,211 + -0.0
825,211 + -0.2
825,224 - -0.1
825,241 - 0.7
825,243 + 0.2
825,244 - 0.1
825,245 - -0.2
825,359 - -0.4
825,376 - -0.2
825,819 - 9648 mRNA_1280 0.28 -0.2
825,826 + 9648 mRNA_1280 0.29 -0.2
826,980 + 0.4
826,982 + -0.1
826,986 + 1.4
827,048 + -0.0
827,056 + 2.0
827,147 - -0.0
827,293 - 0.3
827,305 + 1.1
827,345 + 0.4
827,413 + 1.2
827,425 + 0.2
827,444 + 0.1
827,495 - -0.5
827,512 - 0.7
827,593 - 9649 mRNA_1281 0.11 -0.4
827,594 + 9649 mRNA_1281 0.11 -0.5
827,653 + 9649 mRNA_1281 0.13 0.5
827,858 + 9649 mRNA_1281 0.22 0.3
827,878 - 9649 mRNA_1281 0.23 0.0
827,983 - 9649 mRNA_1281 0.28 -0.4