Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1220

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1219: 9587 - KOG3202 SNARE protein TLG1/Syntaxin 6, at 675233 to 676117 9587 mRNA_1220: 9588 - KOG0254 Predicted transporter (major facilitator superfamily), at 676707 to 679515 9588 mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679841 to 682126 9589

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
676,192 + 0.2
676,343 + 0.6
676,634 - -0.7
676,650 + -0.2
676,651 - 0.8
676,767 + 0.8
676,773 + 1.0
676,787 + 0.5
676,788 + -0.7
676,928 - 0.7
677,196 - 9588 mRNA_1220 0.17 0.2
677,349 + 9588 mRNA_1220 0.23 0.7
677,376 + 9588 mRNA_1220 0.24 0.6
677,627 - 9588 mRNA_1220 0.33 -0.3
677,659 + 9588 mRNA_1220 0.34 -1.5
677,671 - 9588 mRNA_1220 0.34 0.5
677,745 + 9588 mRNA_1220 0.37 -0.3
677,768 + 9588 mRNA_1220 0.38 -1.3
677,823 + 9588 mRNA_1220 0.40 1.3
678,193 - 9588 mRNA_1220 0.53 1.3
678,654 + 9588 mRNA_1220 0.69 0.6
678,921 + 9588 mRNA_1220 0.79 -1.0
679,053 - 9588 mRNA_1220 0.84 0.3
679,070 + 9588 mRNA_1220 0.84 0.0
679,177 - 9588 mRNA_1220 0.88 1.1
679,192 + 9588 mRNA_1220 0.88 0.1
679,330 + 0.2
679,365 - -0.5
679,672 + 2.0
679,769 - 0.9
679,770 - 0.2
679,774 - 0.2
679,781 - 0.8
679,791 - 3.4