Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1203

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1202: 9570 - K11253 H3 histone H3, at 640154 to 640968 9570 mRNA_1203: 9571 - K01049 ACHE acetylcholinesterase, at 641657 to 643946 9571 mRNA_1204: 9572 - K11253 H3 histone H3, at 644516 to 645336 9572

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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641,169 + -0.2
641,177 - 0.3
641,207 - -0.8
641,310 - 0.9
641,318 - 1.2
641,322 - 2.3
641,350 + 0.6
641,365 + -0.4
641,370 + 0.5
641,392 + -0.3
641,395 + -0.6
641,408 - -0.0
641,414 - 1.1
641,417 - -0.5
641,422 + 0.7
641,429 + -1.5
641,485 + 0.2
641,491 + -0.7
641,493 - 0.0
641,494 + 0.5
641,510 + 0.2
641,527 + 1.3
641,528 + -1.3
641,544 + 0.6
641,562 - -0.0
641,594 + 0.2
641,614 - 2.6
641,628 - 1.6
641,667 - 0.2
641,849 + -0.5
641,921 + 9571 mRNA_1203 0.12 -0.1
641,948 + 9571 mRNA_1203 0.13 -0.5
641,957 + 9571 mRNA_1203 0.13 0.6
642,150 + 9571 mRNA_1203 0.22 1.0
642,247 - 9571 mRNA_1203 0.26 -1.2
642,513 - 9571 mRNA_1203 0.37 -0.9
642,514 - 9571 mRNA_1203 0.37 -0.1
642,969 - 9571 mRNA_1203 0.57 0.6
643,012 + 9571 mRNA_1203 0.59 1.8
643,017 + 9571 mRNA_1203 0.59 -0.7
643,400 + 9571 mRNA_1203 0.76 0.0
643,408 - 9571 mRNA_1203 0.76 -0.2
644,125 + -1.0
644,278 - -0.7
644,287 + -0.3
644,349 + 0.5
644,459 + -0.5
644,878 - 9572 mRNA_1204 0.44 -0.4
644,901 + 9572 mRNA_1204 0.47 1.1