Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1176

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1175: 9543 - Hypothetical Protein, at 577542 to 578636 9543 mRNA_1176: 9544 - Hypothetical Protein, at 578866 to 579597 9544 mRNA_1177: 9545 - K15326 TSEN54 tRNA-splicing endonuclease subunit Sen54, at 580188 to 581963 9545

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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577,881 - 9543 mRNA_1175 0.31 0.3
577,991 + 9543 mRNA_1175 0.41 1.5
578,076 - 9543 mRNA_1175 0.49 1.2
578,084 + 9543 mRNA_1175 0.49 -0.1
578,485 - 9543 mRNA_1175 0.86 -0.2
578,787 + 0.0
578,798 - 0.4
578,936 + -0.2
578,954 - 9544 mRNA_1176 0.12 1.4
579,077 - 9544 mRNA_1176 0.29 1.1
579,097 + 9544 mRNA_1176 0.32 -1.0
579,097 + 9544 mRNA_1176 0.32 1.3
579,377 + 9544 mRNA_1176 0.70 -0.3
579,410 + 9544 mRNA_1176 0.74 0.5
579,415 - 9544 mRNA_1176 0.75 0.6
579,422 - 9544 mRNA_1176 0.76 1.6
579,547 + -0.4
579,554 - 0.0
579,555 + 0.6
579,934 - 2.5
579,955 - 1.3
579,957 - 1.5
579,963 + 0.5
580,089 - -1.3