Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1164

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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551,802 - 1.2
551,900 - -1.0
552,323 + 0.2
552,338 - 1.3
552,354 + 1.6
552,650 + -0.7
552,697 - -0.2
552,701 + 0.6
552,761 + 9532 mRNA_1164 0.20 1.2
552,777 - 9532 mRNA_1164 0.27 1.2
552,788 - 9532 mRNA_1164 0.31 1.3
552,789 - 9532 mRNA_1164 0.31 0.5
552,824 + 9532 mRNA_1164 0.45 -0.6
552,848 - 9532 mRNA_1164 0.55 0.8
552,853 + 9532 mRNA_1164 0.57 2.1
553,116 - 1.8
553,137 - -1.1
553,157 + -0.9
553,161 + 1.0
553,270 + 0.8
553,272 - 0.6
553,435 - -0.6
553,528 - 9533 mRNA_1165 0.14 2.1
553,595 - 9533 mRNA_1165 0.21 0.5
553,726 + 9533 mRNA_1165 0.34 0.6
553,732 - 9533 mRNA_1165 0.35 0.2