Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1134

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1133: 9501 - Hypothetical Protein, at 485139 to 486293 9501 mRNA_1134: 9502 - K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B, at 486647 to 489747 9502 mRNA_1135: 9503 - K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1, at 489828 to 492159 9503

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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485,705 - 9501 mRNA_1133 0.49 -0.7
485,774 + 9501 mRNA_1133 0.55 -0.0
485,789 - 9501 mRNA_1133 0.56 -1.1
485,839 + 9501 mRNA_1133 0.61 0.6
485,849 + 9501 mRNA_1133 0.61 0.2
485,927 - 9501 mRNA_1133 0.68 1.4
486,036 - 9501 mRNA_1133 0.78 1.1
486,098 - 9501 mRNA_1133 0.83 -1.9
486,313 + 0.9
486,328 + 0.8
486,361 + 0.7
486,484 - -0.6
486,747 - -0.9
487,099 - 9502 mRNA_1134 0.15 -0.3
489,800 + -0.1
489,803 + -0.0
489,811 - 0.1
489,913 - 0.4