Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1086

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1085: 9453 - Hypothetical Protein, at 373772 to 374332 9453 mRNA_1086: 9454 - Hypothetical Protein, at 374386 to 377567 9454 mRNA_1087: 9455 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 377970 to 379646 9455

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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373,551 + 1.1
373,591 - -0.5
373,591 - 1.2
373,597 + -0.4
373,597 - 1.5
373,746 - 0.3
373,790 - 1.6
373,888 - 9453 mRNA_1085 0.21 0.8
373,919 + 9453 mRNA_1085 0.26 -0.7
373,937 - 9453 mRNA_1085 0.29 0.7
374,882 + 9454 mRNA_1086 0.16 -0.0
374,903 + 9454 mRNA_1086 0.16 2.3
375,227 + 9454 mRNA_1086 0.26 -0.3
375,593 - 9454 mRNA_1086 0.38 0.3
375,625 - 9454 mRNA_1086 0.39 -1.0
375,627 + 9454 mRNA_1086 0.39 -0.6
375,946 + 9454 mRNA_1086 0.49 -1.2
376,326 + 9454 mRNA_1086 0.61 0.5
376,464 + 9454 mRNA_1086 0.65 0.9
376,490 + 9454 mRNA_1086 0.66 1.3
376,571 + 9454 mRNA_1086 0.69 1.9
376,573 - 9454 mRNA_1086 0.69 -0.2
376,639 + 9454 mRNA_1086 0.71 0.2
376,845 + 9454 mRNA_1086 0.77 -0.4
377,013 - 9454 mRNA_1086 0.83 -1.2
377,065 + 9454 mRNA_1086 0.84 1.7
377,086 - 9454 mRNA_1086 0.85 -0.8
377,194 + 9454 mRNA_1086 0.88 -0.2
377,214 - 9454 mRNA_1086 0.89 1.4
377,343 - 0.3
377,487 - 0.4
377,826 - -0.2
377,839 + -1.2
377,861 - -0.3
377,978 - 0.8
378,230 - 9455 mRNA_1087 0.16 -1.3