Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1081

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1080: 9448 - Hypothetical Protein, at 364983 to 366147 9448 mRNA_1081: 9449 - Hypothetical Protein, at 366708 to 367893 9449 mRNA_1082: 9450 - Hypothetical Protein, at 368387 to 368641 9450

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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365,903 + 9448 mRNA_1080 0.79 1.5
365,903 + 9448 mRNA_1080 0.79 0.7
365,910 + 9448 mRNA_1080 0.80 -1.0
365,914 + 9448 mRNA_1080 0.80 -0.5
366,146 + -0.2
366,178 + -0.6
366,337 - -0.1
366,376 - 1.7
366,382 - -0.9
366,395 - 1.5
366,434 - -1.7
366,524 - -1.8
366,527 + 1.0
366,539 - 0.2
366,617 + -0.2
366,844 - 9449 mRNA_1081 0.11 -0.0
366,970 + 9449 mRNA_1081 0.22 -0.6
367,125 - 9449 mRNA_1081 0.35 -0.1
367,478 + 9449 mRNA_1081 0.65 2.5
367,829 - -0.1
368,006 - -0.4
368,012 - 0.7
368,013 + 0.3
368,160 + 0.1
368,183 + 0.9
368,302 - -0.4
368,310 - -0.1
368,331 + -0.3
368,438 - 9450 mRNA_1082 0.20 0.2
368,439 - 9450 mRNA_1082 0.20 0.2
368,472 - 9450 mRNA_1082 0.33 3.0
368,473 - 9450 mRNA_1082 0.34 0.8
368,505 - 9450 mRNA_1082 0.46 0.3
368,568 + 9450 mRNA_1082 0.71 0.7
368,581 - 9450 mRNA_1082 0.76 1.9
368,608 - 9450 mRNA_1082 0.87 0.2
368,611 - 9450 mRNA_1082 0.88 0.7
368,613 + 9450 mRNA_1082 0.89 -0.2
368,649 + 1.6
368,770 + -0.7
368,771 + 1.6