Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1080

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1079: 9447 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 363349 to 364713 9447 mRNA_1080: 9448 - Hypothetical Protein, at 364983 to 366147 9448 mRNA_1081: 9449 - Hypothetical Protein, at 366708 to 367893 9449

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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364,029 + 9447 mRNA_1079 0.50 0.9
364,030 - 9447 mRNA_1079 0.50 -2.2
364,379 - 9447 mRNA_1079 0.75 0.7
364,603 + -1.2
364,938 - 0.1
365,063 + -0.8
365,322 + 9448 mRNA_1080 0.29 0.2
365,903 + 9448 mRNA_1080 0.79 1.5
365,903 + 9448 mRNA_1080 0.79 0.7
365,910 + 9448 mRNA_1080 0.80 -1.0
365,914 + 9448 mRNA_1080 0.80 -0.5
366,146 + -0.2
366,178 + -0.6
366,337 - -0.1
366,376 - 1.7
366,382 - -0.9
366,395 - 1.5
366,434 - -1.7
366,524 - -1.8
366,527 + 1.0
366,539 - 0.2
366,617 + -0.2
366,844 - 9449 mRNA_1081 0.11 -0.0
366,970 + 9449 mRNA_1081 0.22 -0.6
367,125 - 9449 mRNA_1081 0.35 -0.1