Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1079

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1078: 9446 - K00784 rnz ribonuclease Z, at 359854 to 363039 9446 mRNA_1079: 9447 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 363349 to 364713 9447 mRNA_1080: 9448 - Hypothetical Protein, at 364983 to 366147 9448

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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363,094 - 1.5
363,097 - 1.4
363,108 + 1.6
363,131 - 1.2
363,145 + 0.6
363,146 + -0.9
363,156 + 0.8
363,288 + 1.5
363,601 + 9447 mRNA_1079 0.18 1.1
363,667 + 9447 mRNA_1079 0.23 1.0
363,762 + 9447 mRNA_1079 0.30 0.5
363,769 - 9447 mRNA_1079 0.31 0.7
363,772 + 9447 mRNA_1079 0.31 -0.3
363,982 + 9447 mRNA_1079 0.46 -0.3
364,029 + 9447 mRNA_1079 0.50 0.9
364,030 - 9447 mRNA_1079 0.50 -2.2
364,379 - 9447 mRNA_1079 0.75 0.7
364,603 + -1.2
364,938 - 0.1
365,063 + -0.8
365,322 + 9448 mRNA_1080 0.29 0.2