Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1077

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1076: 9444 - K02324 POLE1 DNA polymerase epsilon subunit 1, at 348660 to 356355 9444 mRNA_1077: 9445 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 356751 to 359055 9445 mRNA_1078: 9446 - K00784 rnz ribonuclease Z, at 359854 to 363039 9446

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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356,462 + 2.5
356,507 - 0.5
356,512 - 1.8
356,521 + 0.5
356,526 - -0.2
356,526 - 0.9
356,528 + -0.0
356,538 + 1.1
356,553 + 0.3
356,643 - -1.4
356,822 - -1.1
356,838 + -0.9
356,838 + 0.6
356,839 + 1.9
357,110 + 9445 mRNA_1077 0.16 -0.3
357,117 + 9445 mRNA_1077 0.16 0.2
357,129 - 9445 mRNA_1077 0.16 -0.6
357,384 + 9445 mRNA_1077 0.27 -0.4
357,419 - 9445 mRNA_1077 0.29 0.3
357,562 - 9445 mRNA_1077 0.35 -0.1
357,685 - 9445 mRNA_1077 0.41 1.2
357,718 + 9445 mRNA_1077 0.42 0.2
357,720 + 9445 mRNA_1077 0.42 0.6
357,749 + 9445 mRNA_1077 0.43 0.4
357,880 - 9445 mRNA_1077 0.49 -0.8
357,919 + 9445 mRNA_1077 0.51 1.8
358,045 - 9445 mRNA_1077 0.56 0.3
358,600 + 9445 mRNA_1077 0.80 0.3
358,737 + 9445 mRNA_1077 0.86 -0.0
358,758 - 9445 mRNA_1077 0.87 -0.2
358,909 - -0.0
359,223 + 0.2
359,285 - 1.1
359,331 - -0.8
359,338 + 2.2
359,572 - 0.4
359,574 - -0.1
359,574 - 0.1
359,574 - -0.9
359,581 + -0.1
359,605 - -0.4
359,619 + 0.0
359,620 + -0.2
359,648 - 0.1