Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1055

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1055: 9423 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 292025 to 293259 9423

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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291,083 - -0.4
291,088 - 1.0
291,093 - 0.1
291,102 + -0.4
291,146 - 0.2
291,157 - -0.1
291,158 + 1.6
291,199 + 0.1
291,253 - 0.6
291,269 + -0.3
291,321 - -0.1
291,383 - 0.6
291,415 + 1.3
291,429 + -0.5
291,444 - 0.2
291,448 - 0.2
291,460 + 1.0
291,460 + 0.8
291,462 - -0.1
291,467 + 1.9
291,482 + 1.3
291,500 + 0.0
291,513 + -0.9
291,627 - 0.1
291,633 - 0.2
291,642 + -0.5
291,662 - -0.2
291,664 - -0.4
291,668 + 0.3
291,669 + -0.3
291,681 + 0.9
291,685 + -0.6
291,685 - -1.9
291,739 + 2.9
291,740 + -0.3
291,743 - 0.2
291,747 + 1.4
291,748 - -1.0
291,752 - 0.8
291,761 - 0.0
291,767 - -0.9
291,778 - -1.0
291,779 + 0.1
291,779 + 0.9
291,797 + 2.8
291,801 + 0.1
291,809 - 1.6
291,813 + -2.0
291,816 - 3.3
291,845 - 0.1
291,850 - 0.3
291,853 + 0.3
291,867 + 0.4
291,869 - -0.2
291,873 - 2.0
291,873 + 0.0
291,889 - -0.5
291,903 + 1.0
291,935 + -0.3
291,987 - -0.6
292,012 + 0.1
292,017 + -0.4
292,036 + 0.1
292,040 + 0.8
292,644 + 9423 mRNA_1055 0.50 -0.2
292,893 + 9423 mRNA_1055 0.70 0.5
293,339 + 0.7
293,344 + -0.2
293,346 - -0.3
293,349 + 0.4
293,488 + 0.1
293,495 - 1.0
293,500 + -0.1
293,584 + 0.1
293,589 - 0.5
293,596 - 0.3
293,650 + 0.1
293,658 + -0.4
294,211 - 0.2