Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1052

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277584 to 281665 9419 mRNA_1052: 9420 - K10896 FANCM fanconi anemia group M protein, at 282030 to 286830 9420 mRNA_1053: 9421 - KOG3856 Uncharacterized conserved protein, at 287075 to 287902 9421

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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281,194 - 9419 mRNA_1051 0.88 -0.0
281,482 - 0.4
281,640 + -2.2
281,799 - -0.3
281,809 - 0.0
281,815 - -0.8
281,817 + 1.1
281,819 - -1.3
281,841 - 0.7
281,932 - 1.1
281,951 - -0.1
281,966 - -0.7
281,986 + 0.9
282,006 + 0.3
282,080 + -0.3
282,129 - 0.6
282,161 + -0.5
282,407 + -0.2
282,438 + -0.8
282,494 + 1.3
282,502 + -0.1
282,574 - 9420 mRNA_1052 0.11 -1.1
283,148 - 9420 mRNA_1052 0.23 0.7
283,283 - 9420 mRNA_1052 0.26 0.3
283,298 + 9420 mRNA_1052 0.26 0.2
283,496 + 9420 mRNA_1052 0.31 -0.7
283,515 - 9420 mRNA_1052 0.31 0.9
283,689 + 9420 mRNA_1052 0.35 -0.3
283,772 + 9420 mRNA_1052 0.36 0.5
284,028 + 9420 mRNA_1052 0.42 2.2
284,123 - 9420 mRNA_1052 0.44 -0.3
284,178 + 9420 mRNA_1052 0.45 -0.8
284,306 - 9420 mRNA_1052 0.47 1.7
284,309 - 9420 mRNA_1052 0.47 -3.0
284,421 - 9420 mRNA_1052 0.50 -0.2
284,441 + 9420 mRNA_1052 0.50 0.3
284,818 - 9420 mRNA_1052 0.58 1.5
284,899 + 9420 mRNA_1052 0.60 1.7
285,019 + 9420 mRNA_1052 0.62 2.6
285,327 + 9420 mRNA_1052 0.69 0.2
285,402 + 9420 mRNA_1052 0.70 -0.5
285,801 + 9420 mRNA_1052 0.79 -1.5
286,049 + 9420 mRNA_1052 0.84 1.0
286,140 - 9420 mRNA_1052 0.86 1.3
286,200 + 9420 mRNA_1052 0.87 0.1
286,212 + 9420 mRNA_1052 0.87 -0.1
286,321 + 9420 mRNA_1052 0.89 0.5
286,664 - 1.1
286,738 - 1.1
286,768 - -0.1
286,813 - -1.5
286,946 + 0.9
287,085 + -2.1