Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1015

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1014: 9382 - Hypothetical Protein, at 209891 to 213073 9382 mRNA_1015: 9383 - HMMPfam-Thioesterase superfamily-PF03061,SUPERFAMILY--SSF54637, at 213676 to 214574 9383 mRNA_1016: 9384 - K14833 NOC2 nucleolar complex protein 2, at 214946 to 217442 9384

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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212,679 + 9382 mRNA_1014 0.88 1.0
212,692 - 9382 mRNA_1014 0.88 1.9
212,828 - 2.3
212,862 - 0.3
212,956 - 0.8
213,311 - 1.1
213,319 - -0.7
213,455 - 0.8
213,506 + 0.5
213,553 - 0.5
213,553 - -0.1
213,573 + 1.6
213,980 - 9383 mRNA_1015 0.34 -0.3
214,159 - 9383 mRNA_1015 0.54 1.1
214,184 - 9383 mRNA_1015 0.57 1.5
214,197 + 9383 mRNA_1015 0.58 0.6
214,208 + 9383 mRNA_1015 0.59 -0.3
214,222 - 9383 mRNA_1015 0.61 0.5
214,333 - 9383 mRNA_1015 0.73 -1.3
214,353 + 9383 mRNA_1015 0.75 0.1
214,453 + 9383 mRNA_1015 0.86 0.0
214,466 + 9383 mRNA_1015 0.88 0.5
214,467 - 9383 mRNA_1015 0.88 1.7
214,474 - 9383 mRNA_1015 0.89 0.5
214,597 - -0.7
214,600 + 0.2
214,600 + 0.9
214,611 + 1.5
214,611 - 0.2
214,622 - -0.2
214,627 + 0.0
214,636 - 0.7
214,754 + 0.6
214,760 - 0.1
214,765 - 0.1
214,767 - -0.1
214,786 - 0.8