Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_946

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_945: 9313 - Hypothetical Protein, at 37394 to 37567 9313 mRNA_946: 9314 - Hypothetical Protein, at 38031 to 38831 9314 mRNA_947: 9315 - K00623 CHAT choline O-acetyltransferase, at 38984 to 41581 9315

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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37,240 - -0.4
37,243 + 0.1
37,633 - 2.7
37,785 - 1.1
37,808 + 0.6
37,916 - 0.4
37,922 - 0.8
37,935 - -0.2
37,943 + -0.1
37,943 + 2.3
37,952 + -0.0
37,953 + 0.6
37,956 + -0.0
37,956 - -0.2
37,958 - -0.4
37,960 - -0.3
37,960 - 0.6
37,984 + -0.9
37,990 + 1.5
37,993 + 0.2
37,999 + 0.5
38,002 + -0.1
38,004 + -2.0
38,004 + 0.2
38,004 + 0.9
38,006 - 0.6
38,008 + 0.4
38,026 - 0.7
38,026 - -1.5
38,052 + 0.4
38,064 + -0.2
38,101 + -0.5
38,104 + 2.0
38,150 + 9314 mRNA_946 0.15 0.9
38,193 + 9314 mRNA_946 0.20 0.2
38,264 + 9314 mRNA_946 0.29 1.9
38,288 - 9314 mRNA_946 0.32 0.4
38,309 + 9314 mRNA_946 0.35 1.1
38,382 + 9314 mRNA_946 0.44 -0.1
38,658 - 9314 mRNA_946 0.78 -0.3
38,735 - 9314 mRNA_946 0.88 -0.1
38,844 - 0.1
39,035 - 0.4
39,224 - 0.3
39,513 + 9315 mRNA_947 0.20 0.0
39,666 + 9315 mRNA_947 0.26 -0.0
39,773 + 9315 mRNA_947 0.30 1.7