Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_936

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14546 to 16225 9303 mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16670 to 18291 9304

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
15,676 - 9303 mRNA_935 0.67 1.0
15,682 + 9303 mRNA_935 0.68 0.4
15,683 + 9303 mRNA_935 0.68 1.1
15,687 + 9303 mRNA_935 0.68 1.9
15,689 + 9303 mRNA_935 0.68 1.3
15,813 - 9303 mRNA_935 0.75 -1.7
15,835 - 9303 mRNA_935 0.77 -0.7
15,955 - 9303 mRNA_935 0.84 0.8
16,063 - 0.5
16,110 - 1.2
16,143 + 0.2
16,233 + 1.1
16,275 - -0.9
16,309 - 2.2
16,338 - 0.3
16,448 - -0.0
16,455 + 1.9
16,457 - 1.5
16,467 + -1.2
16,473 - 1.6
16,551 + -0.8
16,603 + 1.2
16,699 + -1.4
16,699 + 1.4
16,746 + 0.2
16,801 + 0.8
17,057 + 9304 mRNA_936 0.24 -0.9
17,190 + 9304 mRNA_936 0.32 0.7
17,339 + 9304 mRNA_936 0.41 1.8
17,615 - 9304 mRNA_936 0.58 0.4
17,727 + 9304 mRNA_936 0.65 2.3
17,813 + 9304 mRNA_936 0.70 2.6
17,909 + 9304 mRNA_936 0.76 0.8
17,959 - 9304 mRNA_936 0.79 0.9
18,343 - -0.2
18,347 + 0.9
18,349 + 0.7
18,359 + -1.2
18,361 + -0.5
18,460 - -1.5
18,486 - 0.5
18,492 - 0.4
18,511 - 0.9
18,621 - -0.2
18,621 - -1.0
18,725 - 1.0
18,735 + -0.9
18,750 - 0.0
18,765 - -0.9
18,774 - 1.0
18,779 - 0.3
18,941 + 0.7
18,954 - 0.7
19,070 + 1.9
19,188 - 0.9
19,201 - -1.3
19,220 + 0.0
19,226 + 0.7
19,228 - 2.3
19,231 + -0.9
19,240 - -1.0