Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1 + 1.2
1 + 1.2
1 + 1.0
1 + 1.1
1 + -1.9
2 + 0.8
2 + -0.7
5 + 0.7
18 + 1.3
30 + 0.1
37 + 0.4
37 + -0.5
41 + 0.4
42 + -0.2
44 + 0.0
49 + 0.0
49 + 0.6
50 + 0.6
54 + 0.2
58 - 0.6
60 - -0.4
60 + -0.1
60 - -0.2
61 - 0.5
61 + -0.4
63 + 1.1
63 + -0.6
63 + 1.6
63 + 1.5
63 + 0.3
63 + 1.3
64 + 1.7
66 - 0.4
66 + -1.2
70 + 0.1
70 + 1.0
70 - -0.0
71 + -1.4
73 + 0.1
75 - 0.9
77 - 1.3
78 + 0.1
78 - 0.3
78 + -0.7
78 + 0.7
78 + 0.4
78 + -0.6
78 + 0.6
78 + 0.3
78 + 0.4
79 + -0.4
81 - 0.4
81 - -0.7
82 + -1.1
85 + 0.8
104 + -0.4
126 + 0.3
126 + 0.6
128 - 0.2
135 + 0.7
142 + -0.8
150 + 1.6
154 + -1.3
157 + 1.0
171 - 0.6
171 + 0.5
172 + -1.2
172 + 0.2
175 - -2.0
176 - 0.7
177 - 1.5
177 - 0.4
191 - -0.8
192 + 1.0
192 + 1.2
192 + 0.5
193 + -0.4
193 + 1.0
193 + -0.8
198 - -1.5
218 + 1.6
225 + 0.7
235 + -1.3
242 + -0.6
263 - -0.9
293 + -0.6
303 + 1.0
333 - 0.2
339 - 0.9
348 + 0.2
349 + -0.9
377 - 0.5
381 - -0.4
469 + -0.6
487 - 9298 mRNA_930 0.10 -0.1
722 + 9298 mRNA_930 0.29 0.3
1,641 - 0.6
1,656 - -0.1
1,768 - 0.2
1,778 - 2.7
1,794 + 0.9