Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_819

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_818: 9186 - HMMPfam-PQ loop repeat-PF04193, at 1950647 to 1952582 9186 mRNA_819: 9187 - KOG1810 Cell cycle-associated protein, at 1953151 to 1958497 9187 mRNA_820: 9188 - K20495 CYP704B1 long-chain fatty acid omega-monooxygenase, at 1958610 to 1960839 9188

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,952,774 - 0.7
1,952,808 + -1.1
1,953,094 + 1.6
1,953,104 + 0.4
1,953,108 + -0.3
1,953,125 + -0.4
1,953,228 - -0.7
1,953,420 + 1.6
1,953,423 + 1.1
1,953,429 + 0.2
1,953,863 - 9187 mRNA_819 0.13 0.4
1,954,116 + 9187 mRNA_819 0.18 -1.5
1,954,307 + 9187 mRNA_819 0.22 1.7
1,954,452 + 9187 mRNA_819 0.24 0.1
1,954,848 + 9187 mRNA_819 0.32 1.1
1,955,462 + 9187 mRNA_819 0.43 2.1
1,955,627 - 9187 mRNA_819 0.46 -0.9
1,955,838 + 9187 mRNA_819 0.50 -0.3
1,956,336 + 9187 mRNA_819 0.60 0.3
1,956,605 - 9187 mRNA_819 0.65 -0.2
1,956,988 - 9187 mRNA_819 0.72 0.7
1,957,230 - 9187 mRNA_819 0.76 -0.3
1,957,610 - 9187 mRNA_819 0.83 0.2
1,957,706 + 9187 mRNA_819 0.85 -1.4
1,957,709 - 9187 mRNA_819 0.85 -1.1
1,957,793 + 9187 mRNA_819 0.87 1.9
1,957,808 - 9187 mRNA_819 0.87 -1.3
1,957,914 - 9187 mRNA_819 0.89 -0.0
1,957,978 + -0.5
1,958,369 - 1.1
1,958,517 - -0.1
1,958,816 + 0.3
1,958,920 + 9188 mRNA_820 0.14 1.0
1,959,238 + 9188 mRNA_820 0.28 -0.4
1,959,238 + 9188 mRNA_820 0.28 0.9