Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_792

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_791: 9159 - HMMPfam-Svf1-like-PF08622,SUPERFAMILY--SSF159245, at 1880384 to 1881933 9159 mRNA_792: 9160 - SUPERFAMILY--SSF52047, at 1882610 to 1885727 9160 mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1885981 to 1887715 9161

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,881,957 - 2.0
1,882,272 - -0.9
1,882,308 + 0.6
1,882,387 + 0.9
1,882,390 - -0.8
1,882,810 + 0.5
1,883,121 + 9160 mRNA_792 0.16 0.7
1,883,235 - 9160 mRNA_792 0.20 2.0
1,883,373 - 9160 mRNA_792 0.24 -1.6
1,883,400 + 9160 mRNA_792 0.25 0.7
1,883,556 + 9160 mRNA_792 0.30 -0.9
1,883,858 + 9160 mRNA_792 0.40 0.9
1,884,132 + 9160 mRNA_792 0.49 1.1
1,884,143 + 9160 mRNA_792 0.49 1.9
1,884,143 - 9160 mRNA_792 0.49 1.0
1,884,292 + 9160 mRNA_792 0.54 -0.6
1,884,570 + 9160 mRNA_792 0.63 0.2
1,884,740 - 9160 mRNA_792 0.68 -0.7
1,884,992 + 9160 mRNA_792 0.76 -1.4
1,885,019 + 9160 mRNA_792 0.77 -0.3
1,885,152 + 9160 mRNA_792 0.82 0.4
1,885,160 - 9160 mRNA_792 0.82 -0.3
1,885,469 + -0.1
1,885,499 - 1.0
1,885,579 - 1.1
1,885,601 - 0.9
1,885,733 + 0.7
1,885,752 - 1.0
1,885,762 - -0.7
1,885,930 + 0.9
1,886,015 - 0.3
1,886,051 - 0.0
1,886,053 + -0.5
1,886,053 + 0.3
1,886,070 + -0.8
1,886,216 + 9161 mRNA_793 0.14 -0.0