Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_719

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_718: 9086 - KOG2776 Metallopeptidase, at 1714383 to 1716364 9086 mRNA_719: 9087 - HMMPfam-Protein of unknown function (DUF3074)-PF11274, at 1716793 to 1718081 9087 mRNA_720: 9088 - K00993 EPT1 ethanolaminephosphotransferase, at 1718861 to 1720406 9088

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,716,240 + 0.0
1,716,264 + -1.1
1,716,296 + 0.2
1,716,300 - 0.6
1,716,404 + -0.6
1,716,409 - -0.2
1,716,417 - -0.6
1,716,421 + -1.2
1,716,426 - 0.2
1,716,431 + -0.1
1,716,434 - -0.9
1,716,436 + 0.0
1,716,438 + 0.7
1,716,632 + -0.2
1,716,655 - 0.9
1,716,665 - 1.3
1,716,666 + 0.8
1,716,666 + -0.1
1,716,668 - -1.3
1,716,675 + -0.2
1,716,675 - 0.1
1,716,679 + 0.2
1,716,687 + 0.0
1,716,687 + -0.8
1,716,688 + 0.4
1,716,689 - -0.1
1,716,822 + 0.5
1,716,824 - -2.3
1,716,985 - 9087 mRNA_719 0.15 -1.6
1,716,986 - 9087 mRNA_719 0.15 0.2
1,716,988 - 9087 mRNA_719 0.15 -1.3
1,716,990 + 9087 mRNA_719 0.15 -0.5
1,716,994 + 9087 mRNA_719 0.16 0.2
1,717,258 + 9087 mRNA_719 0.36 1.2
1,717,270 + 9087 mRNA_719 0.37 -0.5
1,717,447 - 9087 mRNA_719 0.51 1.4
1,717,552 + 9087 mRNA_719 0.59 -1.1
1,717,895 + 9087 mRNA_719 0.85 1.2
1,718,011 + 2.0
1,718,319 - 1.6
1,718,324 + -0.6
1,718,651 + 1.2
1,718,750 + -0.8
1,719,008 - 0.1