Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_449

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_448: 8816 - K20221 IPO4, RANBP4 importin-4, at 1043184 to 1046908 8816 mRNA_449: 8817 - HMMPfam-ESSS subunit of NADH-ubiquinone oxidoreductase (complex I)-PF10183, at 1047187 to 1047536 8817 mRNA_450: 8818 - K09525 DNAJC5 DnaJ homolog subfamily C member 5, at 1048153 to 1050379 8818

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,046,716 + -0.1
1,046,827 + 0.2
1,046,843 - -1.2
1,046,859 + 0.5
1,046,954 + -0.4
1,046,980 - -0.6
1,047,111 + 1.7
1,047,284 - 8817 mRNA_449 0.28 0.0
1,047,988 - 1.1
1,047,995 + -0.5
1,048,012 + 0.5
1,048,018 + 2.3
1,048,037 + -0.7
1,048,039 + -0.0
1,048,042 - -1.0
1,048,049 + 1.5
1,048,194 - 0.1