Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_431

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_430: 8798 - K13704 ABHD12 abhydrolase domain-containing protein 12, at 998852 to 1000348 8798 mRNA_431: 8799 - HMMPfam-SH3-binding, glutamic acid-rich protein-PF04908,ProSiteProfiles-Glutaredoxin domain profile.-PS51354,SUPERFAMILY--SSF52833, at 1000743 to 1002192 8799 mRNA_432: 8800 - KOG4546 Peroxisomal biogenesis protein (peroxin 16), at 1002441 to 1004033 8800

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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999,987 + 8798 mRNA_430 0.76 -0.1
1,000,157 + 8798 mRNA_430 0.87 1.3
1,000,272 + 0.8
1,000,371 - 0.7
1,000,424 - -0.1
1,000,428 + 0.3
1,000,709 + 0.5
1,000,877 + -0.7
1,001,042 + 8799 mRNA_431 0.21 -0.2
1,001,207 + 8799 mRNA_431 0.32 0.1
1,001,727 - 8799 mRNA_431 0.68 1.2
1,002,160 + 1.5
1,002,160 - -0.2
1,002,171 + -1.1
1,002,173 - 0.1
1,002,370 + 0.0